What is the max. PSI you observe under WOT run starting at low-revs in 2nd gear in Sport mode? Also, what are ambient conditions (humidity, temp, elevation) where you are?
I'm unable to coax more than 11 psi (observed) out of my S -- in situation above -- yet it feels to be pulling hard and strong consistently and the ECU is not throwing off any codes. I'm at 7400 miles so clearly nothing to do with break-in. I'm thinking the ECU is simply not calling up higher boost in this case because it is able to achieve its optimal state (combination of boost, back-pressure, turbo-flow, temps) with the lower boost. Perhaps because the ambient air is relatively dry, cool and sea-level -- all contributing to highest density -- to begin with.
Because you're seeing lower max. boost with the GTS versus the 2.0 (in similar ambient conditions presumably), I'm also thinking VTG factors in here. Although somewhat counter-intuitive, possibly improved flow with reduced back-pressure from the large VTG turbo can achieve programmed objectives for peak power with *less than* max. boost. Certainly this is true at the top of the rev band -- maybe it can be true everywhere on the rev band under ideal ambient conditions....